Tree, D. (2013) 'Wnt Signalling', in Harvey, A. (ed.) Cancer Cell Signalling. John Wiley & Sons. pp. 67 - 82. ISBN 10: 1118527755.

Gao, Q., Gilbert, D., Heiner, M., Liu, F., MacCagnola, D. and Tree, D. (2013) 'Multiscale modeling and analysis of planar cell polarity in the drosophila wing'. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 10 (2). pp. 337 - 351. ISSN: 1545-5963

Gao, Q., Liu, F., Gilbert, D., Heiner, M. and Tree, D. (2011) 'A multiscale approach to modelling planar cell polarity in Drosophila wing using hierarchically coloured petri nets'.9th International Conference on Computational Methods in Systems Biology (CMSB 2011). Paris, France. 21 - 23 September. ACM. pp. 209 - 218.

Gao, Q., Liu, F., Tree, D. and Gilbert, D. (2011) 'Multi-cell modelling using coloured petri nets applied to planar cell polarity'.2nd International Workshop on Biological Processes & Petri Nets (BioPPN 2011). Newcastle, UK. 20 CEUR Workshop Proceedings (http://ceur-ws.org). pp. 135 - 150. ISSN: 1613-0073

Bridger, JM., Eskiw, CH., Makarov, EM., Tree, D. and Kill, IR. (2011) 'Progeria Research Day at Brunel University'. Nucleus, 2 (6). pp. 1 - 6. ISSN: 1949-1034

Beard, GS., Bridger, JM., Kill, IR. and Tree, DR. (2008) 'Towards a Drosophila model of Hutchinson-Gilford progeria syndrome'. Biochemical Society Transactions, 36 (Part 6). pp. 1389 - 1392. ISSN: 0300-5127

Tree, D., Amonlirdviman, K., Chen, WS. and Khare, NA. (2005) 'Mathematical modeling of planar cell polarity to understand domineering nonautonomy'. Science, 307 (5708). pp. 423 - 426. ISSN: 0036-8075

Ma, DL., Tree, D., Yang, CH., Simon, M. and Axelrod, J. (2002) 'Feedback loops and gradients determine cortical domains during planar cell polarity signaling.'. DEVELOPMENTAL BIOLOGY, 247 (2). pp. 485 - 485. ISSN: 0012-1606

Tree, D., Ma, D. and Axelrod, JD. (2002) 'A three-tiered mechanism for regulation of planar cell polarity'. Seminars in Cell and Developmental Biology, 13 (3). pp. 217 - 224. ISSN: 1084-9521

Tree, D., Rousset, R., Scott, MP. and Shulman, JM. (2002) 'Prickle mediates feedback amplification to generate asymmetric planar cell polarity signaling'. Cell, 109 (3). pp. 371 - 381. ISSN: 0092-8674